Difference between revisions of "NA-MIC JHU Skull Stripping Collaboration"
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==Grant#== | ==Grant#== | ||
R21EB009900 | R21EB009900 | ||
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== Key Personel== | == Key Personel== | ||
* JHU: Jerry L. Prince, PI, Lotta Ellingsen, Aaron Carass, Snehashis Roy | * JHU: Jerry L. Prince, PI, Lotta Ellingsen, Aaron Carass, Snehashis Roy | ||
* NA-MIC: Nicole Aucoin, Ron Kikinis | * NA-MIC: Nicole Aucoin, Ron Kikinis | ||
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==Funding Duration== | ==Funding Duration== | ||
08/01/2009-07/31/2011 | 08/01/2009-07/31/2011 | ||
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==Goals of the Project== | ==Goals of the Project== | ||
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The primary goals of this proposal are to enhance the NA-MIC code base with a segmentation algorithm that is capable of skull stripping and segmenting both cerebrum and cerebellum separately or collectively in a way which provides accuracy comparable to human raters. | The primary goals of this proposal are to enhance the NA-MIC code base with a segmentation algorithm that is capable of skull stripping and segmenting both cerebrum and cerebellum separately or collectively in a way which provides accuracy comparable to human raters. | ||
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==Aims== | ==Aims== | ||
#Rewrite SPECTRE using the NA-MIC software methodology for inclusion in Slicer 3D | #Rewrite SPECTRE using the NA-MIC software methodology for inclusion in Slicer 3D | ||
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#Parameters will be optimized in order for SPECTRE to perform well with a variety of differelty aquired data | #Parameters will be optimized in order for SPECTRE to perform well with a variety of differelty aquired data | ||
#Compare SPECTRE against all publically available (source or binary) skull-stripping software | #Compare SPECTRE against all publically available (source or binary) skull-stripping software | ||
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==Current progress== | ==Current progress== | ||
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==References== | ==References== | ||
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[[2009_Summer_Project_Week_Skull_Stripping | Summer 2009 Project Week]] | [[2009_Summer_Project_Week_Skull_Stripping | Summer 2009 Project Week]] | ||
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==Publications== | ==Publications== | ||
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* Aaron Carass, M. Bryan Wheeler, Jennifer Cuzzocreo, Pierre-Louis Bazin, Susan S. Bassett and Jerry L. Prince, A Joint Registration and Segmentation Approach to Skull Stripping. Proceedings of the 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2007. | * Aaron Carass, M. Bryan Wheeler, Jennifer Cuzzocreo, Pierre-Louis Bazin, Susan S. Bassett and Jerry L. Prince, A Joint Registration and Segmentation Approach to Skull Stripping. Proceedings of the 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2007. | ||
Revision as of 15:09, 2 December 2009
Home < NA-MIC JHU Skull Stripping CollaborationBack to NA-MIC_External_Collaborations
Contents
Grant#
R21EB009900
Key Personel
- JHU: Jerry L. Prince, PI, Lotta Ellingsen, Aaron Carass, Snehashis Roy
- NA-MIC: Nicole Aucoin, Ron Kikinis
Funding Duration
08/01/2009-07/31/2011
Goals of the Project
The primary goals of this proposal are to enhance the NA-MIC code base with a segmentation algorithm that is capable of skull stripping and segmenting both cerebrum and cerebellum separately or collectively in a way which provides accuracy comparable to human raters.
Aims
- Rewrite SPECTRE using the NA-MIC software methodology for inclusion in Slicer 3D
- Complete the algorithms necessary for isolating and establishing a coordinate system on the cerebellum
- Parameters will be optimized in order for SPECTRE to perform well with a variety of differelty aquired data
- Compare SPECTRE against all publically available (source or binary) skull-stripping software
Current progress
References
Publications
- Aaron Carass, M. Bryan Wheeler, Jennifer Cuzzocreo, Pierre-Louis Bazin, Susan S. Bassett and Jerry L. Prince, A Joint Registration and Segmentation Approach to Skull Stripping. Proceedings of the 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2007.
